| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Arabian Sea | Sea/Bay/Gulf | native | 848 |
| Central Indo-Pacific | sea/bay/gulf | native | |
| Eastern Philippines | Sea/Bay/Gulf | native | 910 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 113712 |
| Gulf of Thailand | Sea/Bay/Gulf | native | 84399 |
| Indian Ocean | Sea/Bay/Gulf | native | 848 |
| Indonesian Sea | Sea/Bay/Gulf | native | 848 |
| Mariana Islands | Sea/Bay/Gulf | native | 101074 |
| New Caledonia | Sea/Bay/Gulf | native | 100373 |
| North Australian Shelf | Sea/Bay/Gulf | native | 848 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 848 |
| Northwest Australian Shelf | Sea/Bay/Gulf | native | 848 |
| Pacific Ocean | Sea/Bay/Gulf | native | 848 |
| Palawan/North Borneo | Sea/Bay/Gulf | native | 848 |
| Red Sea | Sea/Bay/Gulf | native | 848 |
| Red Sea and Gulf of Aden | sea/bay/gulf | native | 848 |
| Somali Coastal Current | Sea/Bay/Gulf | native | 848 |
| South China Sea | Sea/Bay/Gulf | native | 8294 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 848 |
| Sunda Shelf | sea/bay/gulf | native | 848 |
| Sunda Shelf/Java Sea | Sea/Bay/Gulf | native | 848 |
| Tropical Northwestern Pacific | sea/bay/gulf | native | 101074 |
| Tropical Southwestern Pacific | sea/bay/gulf | native | 100373 |
| Tubbataha Reefs | Sea/Bay/Gulf | native | 121724 |
| Verde Island Passage | Sea/Bay/Gulf | native | 115706 |
| West Caroline Islands | Sea/Bay/Gulf | native | 66144 |
| West Philippine Sea | Sea/Bay/Gulf | native | 8294 |
| Western Coral Triangle | sea/bay/gulf | native | 910 |
| Western Indo-Pacific | sea/bay/gulf | native | 848 |