| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Bonaparte Coast | Sea/Bay/Gulf | native | 121705 |
| Exmouth to Broome | Sea/Bay/Gulf | native | 121705 |
| Houtman | Sea/Bay/Gulf | native | 121705 |
| Indian Ocean | Sea/Bay/Gulf | native | 121705 |
| Leeuwin | Sea/Bay/Gulf | native | 121705 |
| Ningaloo | Sea/Bay/Gulf | native | 121705 |
| Shark Bay | Sea/Bay/Gulf | native | 121705 |