| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Bohol Sea | Sea/Bay/Gulf | native | 821 |
| Central Indo-Pacific | sea/bay/gulf | native | 75725 |
| Eastern Indo-Pacific | sea/bay/gulf | native | 3167 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 3204 |
| Indian Ocean | Sea/Bay/Gulf | native | 109447 |
| Indonesian Sea | Sea/Bay/Gulf | native | 75725 |
| Marquesas | Sea/Bay/Gulf | native | 3167 |
| Marquesas - province | Sea/Bay/Gulf | native | 3167 |
| New Caledonia | Sea/Bay/Gulf | native | 99637 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 3204 |
| Northeast Sulawesi | Sea/Bay/Gulf | native | 75725 |
| Pacific Ocean | Sea/Bay/Gulf | native | 3116 |
| Papua | Sea/Bay/Gulf | native | 75725 |
| Sahul Shelf | sea/bay/gulf | native | 3204 |
| South India and Sri Lanka | Sea/Bay/Gulf | native | 109447 |
| Southeast Polynesia | sea/bay/gulf | native | 3167 |
| Tropical Northwestern Pacific | sea/bay/gulf | native | 3116 |
| Tropical Southwestern Pacific | sea/bay/gulf | native | 99637 |
| Tubbataha Reefs | Sea/Bay/Gulf | native | 128987 |
| West Caroline Islands | Sea/Bay/Gulf | native | 103813 |
| Western Coral Triangle | sea/bay/gulf | native | 75725 |